RosettaCon2013
July 28th-31st 2013, Leavenworth, WA













Day 1: Sunday, July 28th


12-1PM Lunch at Kingfisher



1:30-2:30PM Keynote Speaker: Sachdev Sidhu (U Toronto). Chair: Sarel Fleishman (Weizmann Institute)


2:30-3PM Coffee break



3-5:15PM Session 1: Structural Modeling. Chair: John Karanicolas (U Kansas)




5:15-5:45PM Check into rooms, Setup Posters


5:45-7PM Dinner at Kingfisher



7:15-8:15PM Keynote Speaker: David Baker (U Washington).

    The three-helix bundle and beyond

8:15PM Poster session I, Beer, and Company



A special thanks to our sponsors:


Arzeda



Day 2: Monday, July 29th


7:30-9AM Breakfast at Kingfisher


9-10:30AM Small-group discussions


10:30-10:45AM Coffee break


10:45-12PM Session 2: Biomolecular Design I. Chair: Timothy Whitehead (Michigan State U)



  • 10:45 Justin Siegel (UC Davis) and Ingrid Swanson Pultz (U Washington): Development of an oral therapeutic for Celiac disease
  • 11:10 Eva-Maria Strauch (U Washington): Tetris of protein binding (not available for download)
  • 11:35 Steven Lewis (U North Carolina): Structure-based design of an altered specificity antibody Fab interface enables expression of fully IgG bispecific antibodies (not available for download)

12:10-1:30PM Lunch at Kingfisher



1:30-3PM Session 3: Energy Functions. Chair: Sagar Khare (Rutgers U)




3-3:30PM Coffee Break



3:30-5:30PM Session 4: Biomolecular Design II. Chair: Ora Schueler-Furman (Hebrew U)




5:45-7PM Dinner at Kingfisher



7-8PM Keynote Speaker: Barry Honig (Columbia U). Chair: Oliver Lange (Technical U Munich)

    Structure-based prediction of protein-protein interactions on a genome wide scale

8:15PM Poster session II, Beer, and Company




Day 3: Tuesday, July 30th


7:30-9AM Breakfast at Kingfisher


9-10:30AM Small-group discussions


10:30-10:45AM Coffee break


10:45-12PM Small-group Presentations. Chair: Sarel Fleishman (Weizmann Institute)


12:10-1:30PM Lunch at Kingfisher


1:15PM Pictures


1:30-2:30PM Parallel Discussion Sessions

    ROSETTA Academy discussions ROSETTA in Industry Women in ROSETTA Ad hoc meetings

3-5:30PM Parallel Session 5.1: ROSETTA Technology. Chair: Lior Limerman (Weizmann Institute)




3-5:30PM Parallel Session 5.2: ROSETTA Tutorials. Chair: TBA




5:45-7PM Dinner at Kingfisher


7:15-8PM Hike Organization


8-9PM PI Meeting


Day 4: Wednesday, July 31st


Bag lunch, checkout, and hike departures

     
 

The Rosetta Design Group thanks all Participants, the RosettaCommons Community, the University of Washington, and the Sleeping Lady Mountain Retreat for making this event possible.

 
     


backbone

About the Rosetta Design Group


The Rosetta Design Group LLC was established in 2007 to bridge the gap between the RosettaCommons academic community and industry.

 
 
Contract R&D in modeling and bioinformatics

The Rosetta Design Group provides services ranging from assistance for computational scientists in protocol development to fully out-sourced R&D in structural modeing and bioinformatics for computational and experimental groups whose demands exceed their in-house capacities.

 
 
Rosetta Design Group Website: http://www.rosettadesigngroup.com

ROSETTA resources, events, jobs, the Macromolecular Modeling Blog™, and more.

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Industry Participants


Amgen
isogenica
Randal Ketchem
Amgen
Walraj Gosal
Isogenica
Xavier Ambroggio
Rosetta Design Group
Alexandre Zanghellini
Arzeda


Jacob Corn
Yiyuan Yin

Genentech
Vanita Sood
EMD Serono

Lei Jia
Intrexon

Rene de Jong
DSM Biotechnology Center

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Academic Participants


  • RosettaCommons

  • Baker Lab
    UW
  • David Baker
  • Rocco Moretti
  • Christopher Bahl
  • Per Greisen
  • Stephanie Berger
  • Eva-Maria Strauch
  • Yifan Song
  • Erik Procko
  • Enrique Marcos
  • Lei Shi
  • Patrick Conway
  • Hetu K
  • Takahiro Kosugi
  • Hahnbeom Park
  • Christy Tinberg
  • Fabio Parmeggiani
  • Frank DiMaio
  • Sinisa Bjelic
  • Yakov Kipnis
  • Keunwan Park
  • Ingrid Swanson Pultz
  • James Moody
  • Firas Khatib
  • David La
  • Vikram K. Mulligan
  • Austin Day
  • Will Sheffler
  • Jeremy Mills
  • Jiayi Dou
  • Yuan Liu

  • Bonneau Lab
    NYU
  • Richard Bonneau
  • Doug Renfrew
  • Evan Baugh
  • Abba Leffler
  • Kevin Drew
  • Andrew Watkins
  • Noah Youngs
  • Riley Simmons-Edler
  • Emily Koo

  • Das Lab
    Stanford CA
  • Rhiju Das
  • Fang-Chieh Chou
  • Joseph Yesselman

  • Dunbrack Lab
    FCCC
  • Jared Adolf-Bryfogle
  • Maxim Shapovalov
  • Mark Andrake

  • Kortemme Lab
    UCSF
  • Tanja Kortemme
  • Amelie Stein
  • Roland Pache
  • Noah Ollikainen
  • Kyle Barlow
  • Yao-ming Huang

  • Khare Lab
    Rutgers
    U
  • Sagar Khare
  • Beidi Lu
  • Kenny Kostenbader
  • Lu Yang
  • Srinivas Annavarapu

  • Kuhlman Lab
    UNC
  • Brian Kuhlman
  • Andrew Leaver-Fay
  • Ryan Hallett
  • Doonam Kim
  • Tim Jacobs
  • Joseph Harrison
  • Kevin Houlihan

  • Havranek Lab
    Washington U
  • Jim Havranek
  • Adam Joyce
  • Ben Borgo
  • Chi Zhang
  • Roman Sloutsky

  • Gray Lab
    Johns Hopkins University
  • Jeff Gray
  • Jason Labonte
  • Sergey Lyskov

  • Meiler Lab
    Vanderbilt University
  • Jens Meiler
  • Steven Combs
  • Sandeep Kothiwale
  • Gordon Lemmon
  • David Nannemann
  • Stephanie DeLuca
  • Sam DeLuca
  • Amanda Duran
  • Jessica Finn
  • Darwin Fu
  • Elizabeth Nguyen

  • Fleishman Lab
    Weizmann Institute of Science
  • Sarel
  • Gabi
  • Ravit
  • Adi
  • Christoffer
  • Assaf Alon
  • Lior Zimmerman

  • Furman Lab
    Hebrew University
  • Ora Schueler-Furman
  • Orly
  • Nawsad Alam

  • Lange Lab
    TU München
  • Oliver Lange
  • Justin Porter
  • he Zhang
  • aiyong Zhang
  • atjana Braun

  • Richardson Lab
    Duke University
  • Steven Lewis

  • Yarov-Yarovoy Lab
    UC Davis
  • Vladimir Yarov-Yarovoy
  • Jon Sack
  • Drew Tilley
  • Phuong Tran Nguyen
  • Fan Yang
  • Gaurav Bhardwaj

  • Schief Lab
    Scripps Research Institute
  • Name
  • Bill Schief
  • Dan Kulp
  • Shantanu Bhattacharyya
  • Joseph Jardine

  • Rosetta Design Group
  • Xavier Ambroggio

  • Karanicolas Lab
    KU
  • John Karanicolas
  • Jimmy Budiardjo
  • Ragul Gowthaman
  • Andrea Bazzoli
  • Yan Xia

  • Siegel Lab
    UC Davis
  • Justin Siegel
  • Steve Bertolani
  • Derek Decker
  • Terry O'Brien
  • Katie Guggenheim
  • Wilson Mak

  • Strauss Lab
    Los Alamos National Lab
  • Charlie Strauss
  • Hossein Fazelinia
  • Novus Estudio

  • Bax Lab
    NIH
  • Nikolaos Sgourakis

  • Malmstroem Lab
    ETH Zurich
  • Lars Malmstroem
  • George Rosenberger
  • Marija Buljan
  • Abdullah Kahraman

  • Whitehead Lab
    Michigan State
  • Tim Whitehead
  • Justin Klesmith
  • Jim Stapleton
  • Caitlin Kowalsky

  • National Renewable Energy Lab
  • Deanne Sammond

  • Ingemar Andre Lab
  • Ingemar Andre
  • Sebastian Rämisch
  • Robert Lizatovic
  • Wojciech Potrzebowski

  • RosettaCommons Guests

  • Sachdev Sidhu (U Toronto)
  • Barry Honig (Columbia U)
  • Steffen Lindert (UCSD)
  • Joseph Plaks (UC Boulder)
  • Florian Richter (Humboldt U)
  • Luki Goldschmidt (UCLA)
  • Sen Liu (China Three Gorges U)
  • Chu Wang (Scripps)
  • Jenny Hu (UCSF)
  • Colin Smith (Max Planck)
  • Andrew Morin (Harvard, SBGrid)
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