Comments on: Weird PDB statistics http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/ Trading tips and news on modeling proteins, DNA, RNA, small molecules, folding, docking, design..... Mon, 07 May 2012 09:52:00 +0000 hourly 1 http://wordpress.org/?v=3.0 By: admin http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/comment-page-1/#comment-27650 admin Sun, 01 Apr 2012 04:49:03 +0000 http://rosettadesigngroup.com/blog/?p=112#comment-27650 Thank you for that observation! I removed 1yhu :) Thank you for that observation! I removed 1yhu :)

]]> By: Guest http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/comment-page-1/#comment-27629 Guest Wed, 21 Mar 2012 18:26:00 +0000 http://rosettadesigngroup.com/blog/?p=112#comment-27629 The "NP" in 1yuh is short for a ligand called 4-hydroxy-3-nitrophenylacetyl-epsilon-aminocaproic acid, not neptunium. The “NP” in 1yuh is short for a ligand called 4-hydroxy-3-nitrophenylacetyl-epsilon-aminocaproic acid, not neptunium.

]]> By: Steff http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/comment-page-1/#comment-3324 Steff Mon, 06 Apr 2009 12:14:32 +0000 http://rosettadesigngroup.com/blog/?p=112#comment-3324 1s1i does not hold the longest aminoacid chain. Chain 3 is over 2.900 in length, but is an RNA chain in the 60S subunit of the S. cerevisiae ribosome. 1s1i does not hold the longest aminoacid chain. Chain 3 is over 2.900 in length, but is an RNA chain in the 60S subunit of the S. cerevisiae ribosome.

]]> By: Nir London http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/comment-page-1/#comment-2517 Nir London Mon, 02 Mar 2009 17:48:38 +0000 http://rosettadesigngroup.com/blog/?p=112#comment-2517 I didn't know that, but I bet most of those are extracellular or intracellular domains. I didn’t know that, but I bet most of those are extracellular or intracellular domains.

]]> By: Dan Bolser http://rosettadesigngroup.com/blog/112/weird-pdb-statistics/comment-page-1/#comment-2516 Dan Bolser Mon, 02 Mar 2009 17:36:54 +0000 http://rosettadesigngroup.com/blog/?p=112#comment-2516 Cool statistics! Did you know that there are 444 proteins solved by X-ray diffraction that are also classified as 'membrane proteins'? http://pdbwiki.org/index.php/MEMBRANE_PROTEIN_and_X-RAY_DIFFRACTION All the best, Dan. Cool statistics!

Did you know that there are 444 proteins solved by X-ray diffraction that are also classified as ‘membrane proteins’?

http://pdbwiki.org/index.php/MEMBRANE_PROTEIN_and_X-RAY_DIFFRACTION

All the best,

Dan.

]]>